BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007D10SP1|AL425693
(798 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1300 1574 0.0
>3x_Contig1300
Length = 6589
Score = 1574 bits (792), Expect = 0.0
Identities = 795/798 (99%)
Strand = Plus / Plus
Query: 1 cgaaatgaacaaatgtgatgttatcggtactgatatagtgttgaacaattcaaacaccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2979 cgaaatgaacaaatgtgatgttatcggtactgatatagtgttgaacaattcaaacaccaa 3038
Query: 61 cgcaagcgagagagaagtcaaaaagactattttgaaatgcgacattcatatactctgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3039 cgcaagcgagagagaagtcaaaaagactattttgaaatgcgacattcatatactctgtga 3098
Query: 121 tagatactgtacagtgtggacacagttcctaatttcgtgccattctatagaatgatctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3099 tagatactgtacagtgtggacacagttcctaatttcgtgccattctatagaatgatctgt 3158
Query: 181 catatgatgcaaatcaaaaaaaagttaagccttggcaaaaattgtttcatacccttatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3159 catatgatgcaaatcaaaaaaaagttaagccttggcaaaaattgtttcatacccttatat 3218
Query: 241 atttatatacacgtttatagtatttcatacatatatccatatgaataagcctttattaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3219 atttatatacacgtttatagtatttcatacatatatccatatgaataagcctttattaag 3278
Query: 301 ataatcggctacaagcgatggaccaaaagtgaaggccgagagaaaccaagaagtatttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3279 ataatcggctacaagcgatggaccaaaagtgaaggccgagagaaaccaagaagtatttcc 3338
Query: 361 attccgcttcaagtaagtgctagaacagccagaaggaaaagaaggtagaaagaaagaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3339 attccgcttcaagtaagtgctagaacagccagaaggaaaagaaggtagaaagaaagaata 3398
Query: 421 aggtcaggaaacaagataaataaacagcgataggaatgttcgatccatggaccggttcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3399 aggtcaggaaacaagataaataaacagcgataggaatgttcgatccatggaccggttcca 3458
Query: 481 agcttggccagttcccagctgcacttacatctgctctttgcttggcttacctttgtttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3459 agcttggccagttcccagctgcacttacatctgctctttgcttggcttacctttgtttct 3518
Query: 541 tcgcttgamagtatctaggggaaattggaacacaattatatgamaaaggtgtgaaatttt 600
|||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 3519 tcgcttgaaagtatctaggggaaattggaacacaattatatgaaaaaggtgtgaaatttt 3578
Query: 601 cgtatcagtagcctttctcgccagattaccagcagtgagtcttggctgcmaccactgtcg 660
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3579 cgtatcagtagcctttctcgccagattaccagcagtgagtcttggctgcaaccactgtcg 3638
Query: 661 ttcatccccagaaacaaatcccagtccagtttttcttttttcaatttcacaacttttttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3639 ttcatccccagaaacaaatcccagtccagtttttcttttttcaatttcacaacttttttg 3698
Query: 721 cccgcttccactagcaatatctcagaatgaactaatcgagtaaagaagaaattgaaatga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3699 cccgcttccactagcaatatctcagaatgaactaatcgagtaaagaagaaattgaaatga 3758
Query: 781 cacctggaaatgaaatag 798
||||||||||||||||||
Sbjct: 3759 cacctggaaatgaaatag 3776
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7543
Number of Sequences: 1807
Number of extensions: 7543
Number of successful extensions: 75
Number of sequences better than 1.0e-20: 1
length of query: 798
length of database: 10,358,551
effective HSP length: 16
effective length of query: 782
effective length of database: 10,329,639
effective search space: 8077777698
effective search space used: 8077777698
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)